Jayawardene, who took two catches on the first day but was generally untidy behind the stumps, missed the first three overs of the second day's play.
In his absence, opening batsman Kaushal Silva, who has previously worn the gloves three times in tests, kept wickets.
England resumed on 344 for five wickets, with Joe Root unbeaten on 102 and Matt Prior on 76.
(Reporting by Josh Reich; editing by Amlan Chakraborty)
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